Cancer-miRNA Regulatory Network

Compendium of miRNA Target Genes

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Genes Targeted by hsa-mir-1228 in COID Lung Bhattacharjee Cluster 23 Table contains all genes in the COID Lung Bhattacharjee cluster number 23. If a gene harbors a predicted miRNA binding site by one of the three inference methods it is displayed in the final column: M = Weeder-miRvestigator predicted site, P = PITA predicted site and T = TargetScan predicted site. Entrez ID Symbol Description hsa-mir-1228 347733 TUBB2B tubulin, beta 2B [Source:HGNC Symbol;Acc:30829] T 10057 ABCC5 ATP-binding cassette, sub-family C (CFTR/MRP), member 5 [Source:HGNC Symbol;Acc:56] zzz999 6857 SYT1 synaptotagmin I [Source:HGNC Symbol;Acc:11509] P T 23761 PISD phosphatidylserine decarboxylase [Source:HGNC Symbol;Acc:8999] zzz999 6738 TROVE2 TROVE domain family, member 2 [Source:HGNC Symbol;Acc:11313] T 1813 DRD2 dopamine receptor D2 [Source:HGNC Symbol;Acc:3023] zzz999 2030 SLC29A1 solute carrier family 29 (nucleoside transporters), member 1 [Source:HGNC Symbol;Acc:11003] zzz999 351 APP amyloid beta (A4) precursor protein [Source:HGNC Symbol;Acc:620] zzz999 3178 HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 [Source:HGNC Symbol;Acc:5031] zzz999 894 CCND2 cyclin D2 [Source:HGNC Symbol;Acc:1583] P T 23513 SCRIB scribbled homolog (Drosophila) [Source:HGNC Symbol;Acc:30377] zzz999 273 AMPH amphiphysin [Source:HGNC Symbol;Acc:471] T 22839 DLGAP4 discs, large (Drosophila) homolog-associated protein 4 [Source:HGNC Symbol;Acc:24476] P T 9682 KDM4A lysine (K)-specific demethylase 4A [Source:HGNC Symbol;Acc:22978] zzz999 8888 MCM3AP minichromosome maintenance complex component 3 associated protein [Source:HGNC Symbol;Acc:6946] zzz999 6207 RPS13 ribosomal protein S13 [Source:HGNC Symbol;Acc:10386] zzz999 374655 ZNF710 zinc finger protein 710 [Source:HGNC Symbol;Acc:25352] T 5980 REV3L REV3-like, catalytic subunit of DNA polymerase zeta (yeast) [Source:HGNC Symbol;Acc:9968] zzz999 3150 HMGN1 high mobility group nucleosome binding domain 1 [Source:HGNC Symbol;Acc:4984] zzz999 23522 MYST4 MYST histone acetyltransferase (monocytic leukemia) 4 [Source:HGNC Symbol;Acc:17582] T 8715 NOL4 nucleolar protein 4 [Source:HGNC Symbol;Acc:7870] zzz999 6692 SPINT1 serine peptidase inhibitor, Kunitz type 1 [Source:HGNC Symbol;Acc:11246] zzz999 3763 KCNJ6 potassium inwardly-rectifying channel, subfamily J, member 6 [Source:HGNC Symbol;Acc:6267] T 3636 INPPL1 inositol polyphosphate phosphatase-like 1 [Source:HGNC Symbol;Acc:6080] zzz999 27242 TNFRSF21 tumor necrosis factor receptor superfamily, member 21 [Source:HGNC Symbol;Acc:13469] zzz999 169611 OLFML2A olfactomedin-like 2A [Source:HGNC Symbol;Acc:27270] T 440093 H3F3C H3 histone, family 3C [Source:HGNC Symbol;Acc:33164] zzz999 5516 PPP2CB protein phosphatase 2, catalytic subunit, beta isozyme [Source:HGNC Symbol;Acc:9300] zzz999 994 CDC25B cell division cycle 25 homolog B (S. pombe) [Source:HGNC Symbol;Acc:1726] zzz999 6169 RPL38 ribosomal protein L38 [Source:HGNC Symbol;Acc:10349] zzz999 56998 CTNNBIP1 catenin, beta interacting protein 1 [Source:HGNC Symbol;Acc:16913] T 23152 CIC capicua homolog (Drosophila) [Source:HGNC Symbol;Acc:14214] zzz999 9846 GAB2 GRB2-associated binding protein 2 [Source:HGNC Symbol;Acc:14458] T 6621 SNAPC4 small nuclear RNA activating complex, polypeptide 4, 190kDa [Source:HGNC Symbol;Acc:11137] zzz999 79703 C11orf80 chromosome 11 open reading frame 80 [Source:HGNC Symbol;Acc:26197] zzz999 5253 PHF2 PHD finger protein 2 [Source:HGNC Symbol;Acc:8920] T 23705 CADM1 cell adhesion molecule 1 [Source:HGNC Symbol;Acc:5951] P T 57146 TMEM159 transmembrane protein 159 [Source:HGNC Symbol;Acc:30136] zzz999 1809 DPYSL3 dihydropyrimidinase-like 3 [Source:HGNC Symbol;Acc:3015] zzz999 10590 SCGN secretagogin, EF-hand calcium binding protein [Source:HGNC Symbol;Acc:16941] T 22938 SNW1 SNW domain containing 1 [Source:HGNC Symbol;Acc:16696] zzz999 3714 JAG2 jagged 2 [Source:HGNC Symbol;Acc:6189] zzz999 486 FXYD2 FXYD domain containing ion transport regulator 2 [Source:HGNC Symbol;Acc:4026] zzz999 9139 CBFA2T2 core-binding factor, runt domain, alpha subunit 2; translocated to, 2 [Source:HGNC Symbol;Acc:1536] T 23263 MCF2L MCF.2 cell line derived transforming sequence-like [Source:HGNC Symbol;Acc:14576] zzz999 429 ASCL1 achaete-scute complex homolog 1 (Drosophila) [Source:HGNC Symbol;Acc:738] zzz999 288 ANK3 ankyrin 3, node of Ranvier (ankyrin G) [Source:HGNC Symbol;Acc:494] zzz999 7023 TFAP4 transcription factor AP-4 (activating enhancer binding protein 4) [Source:HGNC Symbol;Acc:11745] zzz999 7143 TNR tenascin R (restrictin, janusin) [Source:HGNC Symbol;Acc:11953] zzz999 5045 FURIN furin (paired basic amino acid cleaving enzyme) [Source:HGNC Symbol;Acc:8568] T 7188 TRAF5 TNF receptor-associated factor 5 [Source:HGNC Symbol;Acc:12035] zzz999 2550 GABBR1 gamma-aminobutyric acid (GABA) B receptor, 1 [Source:HGNC Symbol;Acc:4070] zzz999 2897 GRIK1 glutamate receptor, ionotropic, kainate 1 [Source:HGNC Symbol;Acc:4579] zzz999 23241 PACS2 phosphofurin acidic cluster sorting protein 2 [Source:HGNC Symbol;Acc:23794] T 27245 AHDC1 AT hook, DNA binding motif, containing 1 [Source:HGNC Symbol;Acc:25230] zzz999 8190 RAB4B RAB4B, member RAS oncogene family [Source:HGNC Symbol;Acc:9782] zzz999 5747 PTK2 PTK2 protein tyrosine kinase 2 [Source:HGNC Symbol;Acc:9611] zzz999 2555 GABRA2 gamma-aminobutyric acid (GABA) A receptor, alpha 2 [Source:HGNC Symbol;Acc:4076] zzz999 9028 RHBDL1 rhomboid, veinlet-like 1 (Drosophila) [Source:HGNC Symbol;Acc:10007] zzz999 6233 RPS27A ribosomal protein S27a [Source:HGNC Symbol;Acc:10417] zzz999 1804 DPP6 dipeptidyl-peptidase 6 [Source:HGNC Symbol;Acc:3010] T

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